yetF [2019-06-21 11:52:37]

unknown

locus: BSU07140

pI: 7.09

mw: 26.16 kDa

protein length: 231 aa

gene length: 696 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.5|Newly identified sporulation proteins (based on transcription profiling)]
• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

Gene

Coordinates: 784,381 → 785,076

The protein

Protein family

• [SW|UPF0702 family] (according to Swiss-Prot)

Paralogous protein(s)

• [protein|B37938C639FC87DAA72AA82998DA8DF25E63CF37|YdfS]

Structure

• [PDB|3C6F]

[SW|Localization]

• cell membrane (according to UniProt)

Expression and Regulation

Operons

• genes: [gene|18B09A645AC8E13A1AD3B73A0C828E5A0F5D42BB|lplD]-[gene|EBD0F966FD7B3662814D530064BD307561A5CB15|yetF]
  description: [pubmed|22383849]

  sigma factors

  • [protein|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF]: sigma factor, [Pubmed|26577401], in [regulon|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF regulon]

Biological materials

Mutant

• MGNA-B457 (yetF::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1456 NBRP B. subtilis, Japan]
• BKE07140 (Δ[gene|EBD0F966FD7B3662814D530064BD307561A5CB15|yetF]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE07140 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATTGATAGCACCTACTT, downstream forward: _UP4_TGACTCTTAGAAAAAAGCTT
• BKK07140 (Δ[gene|EBD0F966FD7B3662814D530064BD307561A5CB15|yetF]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK07140 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATTGATAGCACCTACTT, downstream forward: _UP4_TGACTCTTAGAAAAAAGCTT

References

• 26577401